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  5. Dusal.0808s00008.1

Dusal.0808s00008.1 (33188936)


Aliases : 33188936

Description : Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0808s00008.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.50 tig00022075_g23611.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
Cre01.g007051 30788581 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cre06.g273600 30779902, RPS27a Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Cz09g22150.t1 No alias Ribosomal protein S27a [Interproscan]. 0.03 OrthoFinder
Cz13g16210.t1 No alias Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
EOD27341 No alias Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
EOD32212 No alias Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.01 OrthoFinder
OT_07G00910.1 No alias Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.03 OrthoFinder
OT_08G01740.1 No alias Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.04 OrthoFinder
PTI_07G02070.1 No alias Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.02 OrthoFinder
Sro305_g112730.1 Contig560.g7114 Polyubiquitin (Fragment) 0.05 OrthoFinder
Sro490_g153470.1 Contig328.g4367 Polyubiquitin (Fragment) 0.04 OrthoFinder
TP05G02210.1 No alias Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.03 OrthoFinder
XM_002501154.1 MICPUN_90428, 90428 Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. 0.04 OrthoFinder
XM_002503017.1 MICPUN_82590, 82590 Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.04 OrthoFinder
XM_003058637.1 MicpuC2_17541, 17541 Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
XM_003062233.1 MicpuC2_51948, 51948 Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001103.1_cds_GFH17141.1_11618 HaLaN_13705, GFH17141 Ribosomal protein S27A component of cytosolic 80S... 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497057.1_786 KAA8497057 Ubiquitin-like protein 1-40S ribosomal protein S27a 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR001975 Ribosomal_L40e 78 127
No external refs found!