Dusal.0766s00003.1 (33188360)

Aliases : 33188360

Description : Transcription factor, GTP-binding domain; Translation elongation factor EFTu-like, domain 2; Elongation factor EFG, domain V-like; GTP-binding protein LepA, C-terminal [Interproscan].

Gene families : OG_01_0000765 (OrthoFinder) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.0766s00003.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
EOD16305 No alias Elongation factor-type GTP-binding protein [Ensembl]. 0.01 OrthoFinder
OT_06G03810.1 No alias Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
Sro371_g128610.1 Contig736.g8439 Elongation factor 4 0.02 OrthoFinder
Transcript_contig_55968 55968 Transcription factor, GTP-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_89468 89468 GTP-binding protein LepA, C-terminal; Transcription... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000640 EFG_V-like 460 545
IPR004161 EFTu-like_2 265 335
IPR000795 T_Tr_GTP-bd_dom 62 241
IPR013842 LepA_CTD 548 653
No external refs found!