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  5. Dusal.0755s00004.1

Dusal.0755s00004.1 (33194805)


Aliases : 33194805

Description : Pseudouridine synthase, RsuA/RluA [Interproscan].


Gene families : OG_01_0000212 (OrthoFinder) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0755s00004.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre02.g095121 30785798 RNA processing.RNA... 0.03 OrthoFinder
Cz07g07230.t1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.03 OrthoFinder
OT_06G04650.1 No alias Pseudouridine synthase, RsuA/RluA; RNA-binding S4 domain... 0.04 OrthoFinder
OT_17G02350.1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
TP06G05090.1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
XM_002508848.1 MICPUN_72176, 72176 Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
XM_003062138.1 MicpuC2_6566, 6566 Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44607.1_2322 PRW44607 Ribosomal large subunit pseudouridine synthase B 0.05 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496505.1_234 KAA8496505 Putative RNA pseudouridine synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 32 141
No external refs found!