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  5. Dusal.0647s00008.1

Dusal.0647s00008.1 (33194458)


Aliases : 33194458

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0004113 (OrthoFinder) Phylogenetic Tree(s): OG0004113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0647s00008.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre08.g374800 30774170 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
OT_01G06450.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
TP02G04640.1 No alias Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61612.1_301 PRW61612 TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004664 prephenate dehydratase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 71 101
IPR001680 WD40_repeat 210 244
IPR001680 WD40_repeat 161 190
No external refs found!