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  5. Dusal.0634s00001.1

Dusal.0634s00001.1 (33202941)


Aliases : 33202941

Description : LsmAD domain; Ataxin 2, SM domain [Interproscan].


Gene families : OG_01_0004365 (OrthoFinder) Phylogenetic Tree(s): OG0004365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0634s00001.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 No description available 0.01 OrthoFinder
Cre01.g063997 30788525 Polyadenylate-binding protein-interacting protein 3... 0.05 OrthoFinder
Cz09g10010.t1 No alias Ataxin-2, C-terminal; LsmAD domain; Ataxin 2, SM domain... 0.02 OrthoFinder
Sro715_g191800.1 Contig4130.g31592 Binding protein 0.04 OrthoFinder
Vocar.0001s0464.1 32885251 LsmAD domain; Ataxin-2, C-terminal; Ataxin 2, SM domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR009604 LsmAD_domain 160 230
IPR025852 SM_dom_ATX 13 90
No external refs found!