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  5. Dusal.0610s00002.1

Dusal.0610s00002.1 (33191023)


Aliases : 33191023

Description : Ribosomal protein S11 [Interproscan].


Gene families : OG_01_0004154 (OrthoFinder) Phylogenetic Tree(s): OG0004154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0610s00002.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001154.44 tig00001154_g7308.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder
Cre11.g480150 30775525, RPS14 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cz12g21160.t1 No alias Ribosomal protein S11 [Interproscan]. 0.1 OrthoFinder
EOD40171 No alias 40S ribosomal protein S14 [Ensembl]. 0.02 OrthoFinder
OT_02G02980.1 No alias Ribosomal protein S11 [Interproscan]. 0.03 OrthoFinder
PTI_07G00350.1 No alias Ribosomal protein S11 [Interproscan]. 0.09 OrthoFinder
Sro1286_g259390.1 Contig2537.g20698 40S ribosomal protein S14 0.11 OrthoFinder
Vocar.0048s0023.1 32893648 Ribosomal protein S11 [Interproscan]. 0.05 OrthoFinder
XM_002507445.1 MICPUN_113929, 113929 Ribosomal protein S14 (RPS14) 0.09 OrthoFinder
lcl|BLLF01000375.1_cds_GFH11112.1_5589 HaLaN_06553, GFH11112 Ribosomal protein 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496975.1_704 KAA8496975 40S ribosomal protein S14 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 30 148
No external refs found!