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Aliases : 33197388
Description : 60s Acidic ribosomal protein [Interproscan].
Gene families : OG_01_0002401 (OrthoFinder) Phylogenetic Tree(s): OG0002401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.0521s00007.1 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020830.75 | tig00020830_g14458.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder | |
| Cre02.g143050 | 30785883, RPP2 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder | |
| Cz11g03220.t1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.06 | OrthoFinder | |
| EOD22996 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_15G02430.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_20G01490.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.07 | OrthoFinder | |
| PTI_21G02280.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.06 | OrthoFinder | |
| Sro1582_g283860.1 | Contig2540.g20713 | Acidic ribosomal protein P2 | 0.01 | OrthoFinder | |
| TP02G00810.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.03 | OrthoFinder | |
| TP08G04160.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0054s0034.1 | 32894621 | 60s Acidic ribosomal protein [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002504932.1 | MICPUN_106274, 106274 | 60s Acidic ribosomal protein [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|LHPG02000015.1_cds_PRW34006.1_2819 | PRW34006 | 60S acidic ribosomal P2 | 0.03 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494472.1_3002 | KAA8494472 | 60S acidic ribosomal protein P2 | 0.03 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494747.1_3277 | KAA8494747 | 60S acidic ribosomal protein P2 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005507 | copper ion binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0007034 | vacuolar transport | IEP | Enrichment |
| MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0042393 | histone binding | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |