Dusal.0521s00006.1 (33197395)

Aliases : 33197395

Description : 60S ribosomal protein L6E [Interproscan].

Gene families : OG_01_0002935 (OrthoFinder) Phylogenetic Tree(s): OG0002935_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.0521s00006.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.127 tig00021127_g18807.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder
Cre01.g011000 30788989, RPL6 Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 OrthoFinder
Cz11g06080.t1 No alias 60S ribosomal protein L6E [Interproscan]. 0.21 OrthoFinder
OT_09G04060.1 No alias 60S ribosomal protein L6E [Interproscan]. 0.2 OrthoFinder
PTI_04G05480.1 No alias 60S ribosomal protein L6E [Interproscan]. 0.24 OrthoFinder
Sro189_g081570.1 Contig744.g8521 60S ribosomal protein L6 0.37 OrthoFinder
Sro68_g038220.1 Contig2027.g17403 60S ribosomal protein L6 0.27 OrthoFinder
SymbC1.scaffold2305.2 2305.2 60S ribosomal protein L6E [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold819.2 819.2 60S ribosomal protein L6E [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0019.1 32896343 60S ribosomal protein L6E [Interproscan]. 0.05 OrthoFinder
XM_002504012.1 MICPUN_108678, 108678 60S ribosomal protein L6E [Interproscan]. 0.23 OrthoFinder
XM_003059548.1 MicpuC2_49628, 49628 60S ribosomal protein L6E [Interproscan]. 0.14 OrthoFinder
lcl|BLLF01001177.1_cds_GFH17624.1_12101 HaLaN_14295, GFH17624 Component of cytosolic 80S ribosome and 60S large subunit 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57743.1_8428 PRW57743 60S ribosomal L6 0.17 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495926.1_1924 KAA8495926 60S ribosomal protein L6 0.31 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR000915 60S_ribosomal_L6E 121 226
No external refs found!