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  5. Dusal.0446s00012.1

Dusal.0446s00012.1 (33201126)


Aliases : 33201126

Description : Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain [Interproscan].


Gene families : OG_01_0003494 (OrthoFinder) Phylogenetic Tree(s): OG0003494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0446s00012.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.22 tig00020965_g16838.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Cre12.g535851 30793369 Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder
Cz05g13020.t1 No alias Ribosomal Proteins L2, RNA binding domain; Ribosomal... 0.13 OrthoFinder
EOD38182 No alias Ribosomal Proteins L2, RNA binding domain; Ribosomal... 0.16 OrthoFinder
OT_04G01870.1 No alias Ribosomal Proteins L2, RNA binding domain; Ribosomal... 0.08 OrthoFinder
PTI_11G02510.1 No alias Ribosomal Proteins L2, RNA binding domain; Ribosomal... 0.22 OrthoFinder
Sro1384_g268110.1 Contig2234.g18573 60S ribosomal protein L8 0.22 OrthoFinder
TP14G02630.1 No alias Ribosomal protein L2, C-terminal; Ribosomal Proteins L2,... 0.23 OrthoFinder
Vocar.0043s0070.1 32886882 Ribosomal protein L2, C-terminal; Ribosomal Proteins L2,... 0.03 OrthoFinder
XM_002504886.1 MICPUN_95460, 95460 Ribosomal Proteins L2, RNA binding domain; Ribosomal... 0.19 OrthoFinder
XM_003060635.1 MicpuC2_49650, 49650 Ribosomal Proteins L2, RNA binding domain; Ribosomal... 0.06 OrthoFinder
lcl|BLLF01003547.1_cds_GFH27617.1_22094 HaLaN_25972, GFH27617 Ribosomal_L2_C domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45027.1_1889 PRW45027 60S ribosomal L8 0.08 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494059.1_3923 KAA8494059 60S ribosomal protein L8 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 98 221
IPR022666 Rbsml_prot_L2_RNA-bd_dom 11 90
No external refs found!