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  5. Dusal.0355s00006.1

Dusal.0355s00006.1 (33196333)


Aliases : 33196333

Description : YlmH, putative RNA-binding domain; RNA-binding S4 domain [Interproscan].


Gene families : OG_01_0004928 (OrthoFinder) Phylogenetic Tree(s): OG0004928_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dusal.0355s00006.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_8648 8648 Hypothetical protein 0.02 OrthoFinder
XM_003062199.1 MicpuC2_6221, 6221 YlmH, putative RNA-binding domain; RNA-binding S4 domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 227 272
IPR040591 YlmH_RBD 131 208
No external refs found!