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  5. Dusal.0335s00016.1

Dusal.0335s00016.1 (33196473)


Aliases : 33196473

Description : ABC transporter-like; ABC-transporter extension domain [Interproscan].


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0335s00016.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.98 tig00020629_g12419.t1 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre01.g023787 30789637 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre01.g034950 30788752 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre11.g467781 30775790 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz03g13130.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.01 OrthoFinder
Cz07g32170.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
OT_05G02420.1 No alias ABC-transporter extension domain; ABC transporter-like;... 0.01 OrthoFinder
Sro2585_g331900.1 Contig1533.g13925 Tylosin resistance ATP-binding protein TlrC 0.01 OrthoFinder
TP01G10170.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.03 OrthoFinder
Transcript_contig_54041 54041 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0777.1 32886021 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_002500098.1 MICPUN_55988, 55988 ATP-binding cassette superfamily 0.04 OrthoFinder
XM_002502487.1 MICPUN_58625, 58625 ABC-transporter extension domain; ZC3H15/TMA46 family,... 0.02 OrthoFinder
XM_003057748.1 MicpuC2_44200, 44200 ATP-binding cassette superfamily 0.05 OrthoFinder
XM_003060298.1 MicpuC2_60050, 60050 ABC transporter 0.03 OrthoFinder
lcl|BLLF01000100.1_cds_GFH07516.1_1993 HaLaN_02328, GFH07516 ABC transporter-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 406 543
IPR032781 ABC_tran_Xtn 290 374
IPR003439 ABC_transporter-like_ATP-bd 93 249
No external refs found!