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  5. Cpa|evm.model.tig00020816.32

Cpa|evm.model.tig00020816.32 (tig00020816_g14119.t1)


Aliases : tig00020816_g14119.t1

Description : Myosin-12 OS=Arabidopsis thaliana


Gene families : OG_01_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020816.32
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.22 tig00000241_g20880.t1 Myosin-11 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020553.108 tig00020553_g10595.t1 Myosin-7 OS=Arabidopsis thaliana 0.03 OrthoFinder
EOD17958 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
EOD19528 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
PTI_12G02850.1 No alias CBS domain; Myosin head, motor domain; PB1 domain [Interproscan]. 0.01 OrthoFinder
Sro1732_g294170.1 Contig1542.g14001 Unconventional myosin-Ic 0.01 OrthoFinder
TP02G09630.1 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
Vocar.0004s0052.1 32890010 Myosin, N-terminal, SH3-like; IQ motif, EF-hand binding... 0.02 OrthoFinder
Vocar.0028s0060.1 32895733 Myosin head, motor domain; IQ motif, EF-hand binding... 0.01 OrthoFinder
XM_003061906.1 MicpuC2_28890, 28890 Dilute domain; Myosin head, motor domain; Myosin,... 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05837.1_6021 PRW05837 Myosin heavy class XI isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 237 683
IPR001609 Myosin_head_motor_dom 45 159
No external refs found!