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  5. Dusal.0255s00016.1

Dusal.0255s00016.1 (33188951)


Aliases : 33188951

Description : Ribonuclease M5, C-terminal domain; TOPRIM domain [Interproscan].


Gene families : OG_01_0007035 (OrthoFinder) Phylogenetic Tree(s): OG0007035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0255s00016.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_59200 59200 Hypothetical protein 0.01 OrthoFinder
Vocar.0006s0387.1 32894147 TOPRIM domain; Ribonuclease M5, C-terminal domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000314 organellar small ribosomal subunit IEP Enrichment
CC GO:0005763 mitochondrial small ribosomal subunit IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
CC GO:0015935 small ribosomal subunit IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR025156 RNase_M5_C 260 348
IPR006171 TOPRIM_domain 135 204
No external refs found!