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  5. Dusal.0238s00006.1

Dusal.0238s00006.1 (33193657)


Aliases : 33193657

Description : ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain [Interproscan].


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0238s00006.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.28 tig00000655_g2853.t1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cre10.g465550 30790230, CLPD1 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.05 OrthoFinder
Cre12.g533351 30793290 Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_14G01120.1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.02 OrthoFinder
SymbC1.scaffold1.1846 1.1846 Clp ATPase, C-terminal; ATPase, AAA-type, core; Clp,... 0.02 OrthoFinder
SymbC1.scaffold1.256 1.256 Beta propeller domain-containing family; Dockerin type I... 0.02 OrthoFinder
SymbC1.scaffold1302.4 1302.4 Clp ATPase, C-terminal; ATPase, AAA-type, core; Clp,... 0.01 OrthoFinder
SymbC1.scaffold685.19 685.19 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA... 0.03 OrthoFinder
Vocar.0001s1202.1 32886168 ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 414 489
IPR004176 Clp_R_dom 143 180
IPR004176 Clp_R_dom 56 101
IPR003959 ATPase_AAA_core 606 786
IPR019489 Clp_ATPase_C 793 873
IPR003959 ATPase_AAA_core 266 405
No external refs found!