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  5. Dusal.0231s00018.1

Dusal.0231s00018.1 (33188188)


Aliases : 33188188

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0231s00018.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cz08g09080.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
EOD31364 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
EOD36218 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
EOD37462 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Sro53_g031580.1 Contig1592.g14498 Cold-inducible RNA-binding protein 0.01 OrthoFinder
Sro979_g227190.1 Contig4114.g31401 29 kDa ribonucleoprotein 0.01 OrthoFinder
Vocar.0001s0026.1 32885509 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_003056785.1 MicpuC2_9129, 9129 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_003062259.1 MicpuC2_42094, 42094 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01005805.1_cds_GFH31654.1_26131 HaLaN_30736, GFH31654 RRM domain-containing protein 0.02 OrthoFinder
lcl|BLLF01007141.1_cds_GFH32791.1_27268 HaLaN_32072, GFH32791 RRM domain-containing protein 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498210.1_7163 KAA8498210 Peptidyl-prolyl cis-trans isomerase E 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 74
No external refs found!