Aliases : 33201848
Description : Ribosomal protein S27a; Ubiquitin-like domain [Interproscan].
Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dusal.0222s00011.1 | |
Cluster | HCCA: Cluster_109 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00022075.50 | tig00022075_g23611.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder | |
Cre01.g007051 | 30788581 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder | |
Cre06.g273600 | 30779902, RPS27a | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | OrthoFinder | |
Cz09g22150.t1 | No alias | Ribosomal protein S27a [Interproscan]. | 0.16 | OrthoFinder | |
Cz13g16210.t1 | No alias | Ubiquitin-like domain [Interproscan]. | 0.06 | OrthoFinder | |
EOD24536 | No alias | Ribosomal protein L41; Ubiquitin-like domain [Interproscan]. | 0.05 | OrthoFinder | |
EOD32212 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.1 | OrthoFinder | |
EOD34096 | No alias | Ribosomal protein L41; Ubiquitin-like domain [Interproscan]. | 0.05 | OrthoFinder | |
EOD36186 | No alias | Ubiquitin-like domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD38729 | No alias | Ubiquitin-like domain [Interproscan]. | 0.01 | OrthoFinder | |
OT_07G00910.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.11 | OrthoFinder | |
OT_08G01740.1 | No alias | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.12 | OrthoFinder | |
PTI_07G02070.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.13 | OrthoFinder | |
Sro305_g112730.1 | Contig560.g7114 | Polyubiquitin (Fragment) | 0.17 | OrthoFinder | |
Sro490_g153470.1 | Contig328.g4367 | Polyubiquitin (Fragment) | 0.18 | OrthoFinder | |
TP05G02210.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.1 | OrthoFinder | |
Vocar.0002s0346.1 | 32890766 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.1 | OrthoFinder | |
Vocar.0009s0373.1 | 32893174 | Ubiquitin-like domain [Interproscan]. | 0.04 | OrthoFinder | |
Vocar.0024s0156.1 | 32890529 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.06 | OrthoFinder | |
Vocar.0031s0093.1 | 32890066 | Ubiquitin-like domain [Interproscan]. | 0.03 | OrthoFinder | |
XM_002501154.1 | MICPUN_90428, 90428 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.16 | OrthoFinder | |
XM_002503017.1 | MICPUN_82590, 82590 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.12 | OrthoFinder | |
XM_003058637.1 | MicpuC2_17541, 17541 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.07 | OrthoFinder | |
XM_003061910.1 | MicpuC2_28921, 28921 | Ubiquitin | 0.02 | OrthoFinder | |
lcl|LHPG02000002.1_cds_PRW60289.1_4387 | PRW60289 | Ubiquitin-40S ribosomal S27a | 0.09 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56465.1_9834 | PRW56465 | Ubiquitin-60S ribosomal L40 | 0.06 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497057.1_786 | KAA8497057 | Ubiquitin-like protein 1-40S ribosomal protein S27a | 0.07 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493558.1_4320 | KAA8493558 | Ubiquitin-60S ribosomal protein L40-2 | 0.1 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0004358 | glutamate N-acetyltransferase activity | IEP | Enrichment |
BP | GO:0006525 | arginine metabolic process | IEP | Enrichment |
BP | GO:0006526 | arginine biosynthetic process | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
No external refs found! |