Dusal.0221s00014.1 (33197582)


Aliases : 33197582

Description : Pseudouridine synthase II, N-terminal; tRNA pseudouridylate synthase B, C-terminal [Interproscan].


Gene families : OG_01_0000746 (OrthoFinder) Phylogenetic Tree(s): OG0000746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0221s00014.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cz09g04080.t1 No alias tRNA pseudouridylate synthase B, C-terminal;... 0.02 OrthoFinder
PTI_07G03170.1 No alias Pseudouridine synthase II, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_002502941.1 MICPUN_83242, 83242 tRNA pseudouridylate synthase B, C-terminal;... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500026.1_8979 KAA8500026 TRNA pseudouridine synthase B 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494809.1_3339 KAA8494809 TRNA pseudouridine synthase B 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491932.1_4940 KAA8491932 Putative tRNA pseudouridine synthase 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002501 PsdUridine_synth_N 11 98
IPR032819 TruB_C 232 276
No external refs found!