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  5. Dusal.0215s00004.1

Dusal.0215s00004.1 (33185763)


Aliases : 33185763

Description : ATP-dependent RNA helicase Ski2, C-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain; rRNA-processing arch domain [Interproscan].


Gene families : OG_01_0000182 (OrthoFinder) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0215s00004.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre06.g289950 30779809 RNA processing.RNA decay.exosome complex.associated... 0.02 OrthoFinder
OT_01G02950.1 No alias ATP-dependent RNA helicase Ski2, C-terminal; Ski2,... 0.02 OrthoFinder
OT_10G00080.1 No alias ATP-dependent RNA helicase Ski2, C-terminal; DEAD/DEAH... 0.02 OrthoFinder
PTI_02G06900.1 No alias rRNA-processing arch domain; ATP-dependent RNA helicase... 0.01 OrthoFinder
PTI_28G01510.1 No alias ATP-dependent RNA helicase Ski2, C-terminal; Helicase,... 0.01 OrthoFinder
Sro345_g122480.1 Contig2266.g18807 Viralicidic activity 2-like 2 0.01 OrthoFinder
Sro587_g171320.1 Contig2233.g18555 Viralicidic activity 2-like 2 0.01 OrthoFinder
SymbC1.scaffold1101.8 1101.8 rRNA-processing arch domain; DEAD/DEAH box helicase... 0.02 OrthoFinder
Vocar.0001s0944.1 32886100 DEAD/DEAH box helicase domain; ATP-dependent RNA... 0.02 OrthoFinder
XM_003056641.1 MicpuC2_32119, 32119 rRNA-processing arch domain; ATP-dependent RNA helicase... 0.02 OrthoFinder
lcl|BLLF01003501.1_cds_GFH27512.1_21989 HaLaN_25843, GFH27512 Hypothetical protein 0.06 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61094.1_711 PRW61094 Superkiller viralicidic activity 2-like 2 isoform B 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61095.1_712 PRW61095 Superkiller viralicidic activity 2-like 2 isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR025696 rRNA_proc-arch_dom 537 725
IPR012961 Ski2_C 810 979
IPR011545 DEAD/DEAH_box_helicase_dom 99 156
IPR001650 Helicase_C 401 480
No external refs found!