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Aliases : 33202580
Description : FCP1 homology domain [Interproscan].
Gene families : OG_01_0000609 (OrthoFinder) Phylogenetic Tree(s): OG0000609_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.0212s00004.1 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz01g21150.t1 | No alias | FCP1 homology domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW58990.1_7232 | PRW58990 | Carboxy-terminal domain RNA polymerase II polypeptide A... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| MF | GO:0008418 | protein-N-terminal asparagine amidohydrolase activity | IEP | Enrichment |
| MF | GO:0010181 | FMN binding | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Enrichment |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004274 | FCP1_dom | 155 | 306 |
| No external refs found! |