Dusal.0208s00022.1 (33194129)

Aliases : 33194129

Description : Diaminopimelate epimerase, DapF; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB C-terminal domain [Interproscan].

Gene families : OG_01_0002743 (OrthoFinder) Phylogenetic Tree(s): OG0002743_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dusal.0208s00022.1

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro35_g022630.1	Contig3323.g26140	26S proteasome regulatory subunit 4	0.02	OrthoFinder
lcl\|VRMN01000010.1_cds_KAA8492200.1_5383	KAA8492200	26S proteasome regulatory subunit 4-like B	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006553	lysine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
MF	GO:0008837	diaminopimelate epimerase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009085	lysine biosynthetic process	None	Extended
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016854	racemase and epimerase activity	None	Extended
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046451	diaminopimelate metabolic process	None	Extended
MF	GO:0047661	amino-acid racemase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
BP	GO:0010970	transport along microtubule	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
BP	GO:0022406	membrane docking	IEP	Enrichment
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	Enrichment
BP	GO:0031503	protein-containing complex localization	IEP	Enrichment
BP	GO:0042073	intraciliary transport	IEP	Enrichment
BP	GO:0048278	vesicle docking	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0051640	organelle localization	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0099111	microtubule-based transport	IEP	Enrichment
BP	GO:0140029	exocytic process	IEP	Enrichment
BP	GO:0140056	organelle localization by membrane tethering	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001653	DAP_epimerase_DapF	168	288
IPR001653	DAP_epimerase_DapF	15	134
IPR041569	AAA_lid_3	680	724
IPR003959	ATPase_AAA_core	525	657
IPR032501	Prot_ATP_ID_OB	412	466

External Links

No external refs found!

Dusal.0208s00022.1 (33194129)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation