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Aliases : 33194114
Description : AP complex, mu/sigma subunit [Interproscan].
Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.0208s00019.1 | |
| Cluster | HCCA: Cluster_149 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre07.g324600 | 30775415, AP2S2 | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.03 | OrthoFinder | |
| Cre07.g330950 | 30774543, AP4S4 | Vesicle trafficking.endomembrane trafficking.vacuolar... | 0.05 | OrthoFinder | |
| Cre09.g394100 | 30781425, AP1S1 | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.05 | OrthoFinder | |
| Cz17g12080.t1 | No alias | AP complex, mu/sigma subunit [Interproscan]. | 0.02 | OrthoFinder | |
| Sro782_g201730.1 | Contig2391.g19597 | AP-2 complex subunit sigma | 0.01 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499113.1_8066 | KAA8499113 | AP-1 complex subunit sigma-2 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000045 | autophagosome assembly | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005739 | mitochondrion | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Enrichment |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Enrichment |
| BP | GO:0007033 | vacuole organization | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Enrichment |
| MF | GO:0033218 | amide binding | IEP | Enrichment |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Enrichment |
| MF | GO:0042277 | peptide binding | IEP | Enrichment |
| BP | GO:0043631 | RNA polyadenylation | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0045185 | maintenance of protein location | IEP | Enrichment |
| MF | GO:0046923 | ER retention sequence binding | IEP | Enrichment |
| BP | GO:0051235 | maintenance of location | IEP | Enrichment |
| BP | GO:0051651 | maintenance of location in cell | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070925 | organelle assembly | IEP | Enrichment |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1905037 | autophagosome organization | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022775 | AP_mu_sigma_su | 1 | 140 |
| No external refs found! |