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  5. Dusal.0177s00014.1

Dusal.0177s00014.1 (33189755)


Aliases : 33189755

Description : WD40 repeat; PLAT/LH2 domain [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0177s00014.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.33 tig00000042_g15425.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000042.34 tig00000042_g15425.t1 Calpain-type cysteine protease DEK1 OS=Zea mays 0.04 OrthoFinder
Cpa|evm.model.tig00000178.39 tig00000178_g12750.t1 Cilia- and flagella-associated protein 44... 0.03 OrthoFinder
Cpa|evm.model.tig00001024.12 tig00001024_g6321.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001127.25 tig00001127_g7158.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001484.3 tig00001484_g8911.t1 No description available 0.02 OrthoFinder
Cre01.g010880 30789173 Cilia- and flagella-associated protein 44... 0.02 OrthoFinder
Cre03.g178100 30787264 No description available 0.03 OrthoFinder
Cre06.g303400 30779939, FAP16 No description available 0.04 OrthoFinder
Cre10.g436000 30790221 No description available 0.02 OrthoFinder
Cre12.g538850 30791952 No description available 0.03 OrthoFinder
Cz01g41160.t1 No alias WD40 repeat; HELP [Interproscan]. 0.07 OrthoFinder
Cz01g41170.t1 No alias WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.04 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.02 OrthoFinder
Cz11g19130.t1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.07 OrthoFinder
Dusal.0100s00008.1 33202476 HELP [Interproscan]. 0.03 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.01 OrthoFinder
Vocar.0013s0017.1 32896445 WD40 repeat; HELP; Anaphase-promoting complex subunit 4,... 0.02 OrthoFinder
Vocar.0029s0133.1 32887586 WD40 repeat [Interproscan]. 0.04 OrthoFinder
XM_002501383.1 MICPUN_100113, 100113 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002501695.1 MICPUN_100032, 100032 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002502455.1 MICPUN_58565, 58565 HELP; PLAT/LH2 domain; WD40 repeat [Interproscan]. 0.05 OrthoFinder
XM_002504527.1 MICPUN_61281, 61281 HELP; WD40 repeat [Interproscan]. 0.04 OrthoFinder
XM_002505973.1 MICPUN_64185, 64185 Anaphase-promoting complex subunit 4, WD40 domain [Interproscan]. 0.03 OrthoFinder
XM_002508893.1 MICPUN_52616, 52616 Hypothetical protein 0.03 OrthoFinder
XM_003055148.1 MicpuC2_6804, 6804 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003062633.1 MicpuC2_4590, 4590 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003063748.1 MicpuC2_42955, 42955 HELP; WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000485.1_cds_GFH12272.1_6749 HaLaN_07922, GFH12272 PLAT/LH2 domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16041.1_10518 HaLaN_12387, GFH16041 WD_REPEATS_REGION domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16043.1_10520 HaLaN_12389, GFH16043 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59716.1_6391 PRW59716 Lipoxygenase homology domain-containing 1 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 371 406
IPR001680 WD40_repeat 123 155
IPR001024 PLAT/LH2_dom 1379 1485
IPR001024 PLAT/LH2_dom 998 1110
IPR001024 PLAT/LH2_dom 2322 2426
IPR001024 PLAT/LH2_dom 2503 2606
IPR001024 PLAT/LH2_dom 1625 1666
IPR001024 PLAT/LH2_dom 2198 2300
IPR001024 PLAT/LH2_dom 1946 2049
IPR001024 PLAT/LH2_dom 2071 2173
IPR001024 PLAT/LH2_dom 614 720
IPR001024 PLAT/LH2_dom 1127 1229
IPR001024 PLAT/LH2_dom 1687 1791
IPR001024 PLAT/LH2_dom 1249 1365
IPR001024 PLAT/LH2_dom 488 592
IPR001024 PLAT/LH2_dom 1817 1920
IPR001024 PLAT/LH2_dom 868 977
IPR001024 PLAT/LH2_dom 742 850
No external refs found!