Aliases : tig00020780_g13797.t2
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00020780.48 | |
Cluster | HCCA: Cluster_107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre16.g677382 | 30777694 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder | |
Cz10g17100.t1 | No alias | Myb-like DNA-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
Dusal.0270s00001.1 | 33190010 | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
EOD11048 | No alias | Myb-like DNA-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD36531 | No alias | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD39718 | No alias | Myb-like DNA-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
PTI_06G00320.1 | No alias | Myb-like DNA-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
PTI_20G01740.1 | No alias | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
Sro87_g046050.1 | Contig2014.g17213 | Myb-related protein A | 0.01 | OrthoFinder | |
Transcript_contig_55654 | 55654 | SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_57499 | 57499 | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
Vocar.0001s1620.1 | 32884611 | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
lcl|BLLF01000902.1_cds_GFH15798.1_10275 | HaLaN_12098, GFH15798 | Myb-like DNA-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
lcl|LHPG02000012.1_cds_PRW45035.1_1994 | PRW45035 | Homeodomain | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497884.1_6837 | KAA8497884 | Myb-related protein B | 0.03 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498292.1_7245 | KAA8498292 | Transcriptional activator Myb | 0.02 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499442.1_8395 | KAA8499442 | Transcription factor MYB52 | 0.03 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494855.1_3385 | KAA8494855 | Transcription factor | 0.02 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493266.1_9567 | KAA8493266 | Transcription factor MYB44 | 0.03 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492832.1_2568 | KAA8492832 | Transcriptional activator Myb | 0.01 | OrthoFinder | |
lcl|VRMN01000010.1_cds_KAA8492231.1_5414 | KAA8492231 | Myb-like protein L | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003774 | motor activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
CC | GO:0016459 | myosin complex | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001005 | SANT/Myb | 27 | 74 |
No external refs found! |