- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 33191827
Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.0125s00005.1 | |
| Cluster | HCCA: Cluster_53 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g156900 | 30787808, LHCBM5 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre06.g278213 | 30779171, LHCA6 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.04 | OrthoFinder | |
| Cre06.g284250 | 30779962, LHCBM8 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Cre10.g425900 | 30790196, LHCA5 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.03 | OrthoFinder | |
| Cre10.g452050 | 30790835, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.05 | OrthoFinder | |
| Cre12.g548400 | 30793460, LHCBM2 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre16.g673650 | 30777655, LHCB5 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre17.g720250 | 30782643, LHCB4 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cz01g23030.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz02g14140.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Cz03g26240.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz04g04130.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| Cz04g09210.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz08g11160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz09g32070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz10g10160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz12g16070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz15g17110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz16g14150.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| OT_01G04980.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| OT_02G03050.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_02G04550.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_03G04960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| OT_05G03910.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_09G04490.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| OT_14G01300.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_16G00460.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| OT_16G02540.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| OT_18G01270.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_17G00760.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_58645 | 58645 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_59040 | 59040 | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| Transcript_contig_79146 | 79146 | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Transcript_contig_79793 | 79793 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| UNPLg00080.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0002s0071.1 | 32890569 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0011s0017.1 | 32895358 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0014s0016.1 | 32888452 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0015s0072.1 | 32899153 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0018s0037.1 | 32898532 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002499584.1 | MICPUN_113644, 113644 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.03 | OrthoFinder | |
| XM_002500047.1 | MICPUN_93465, 93465 | Prasinophyte specific light harvesting complex protein,... | 0.03 | OrthoFinder | |
| XM_002501106.1 | MICPUN_90394, 90394 | Chlorophyll a/b-binding protein, psi-associated,... | 0.03 | OrthoFinder | |
| XM_002506245.1 | MICPUN_92498, 92498 | Chlorophyll a/b-binding protein CP29, chloroplast... | 0.03 | OrthoFinder | |
| XM_003056380.1 | MicpuC2_45265, 45265 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.03 | OrthoFinder | |
| lcl|BLLF01000146.1_cds_GFH08210.1_2687 | HaLaN_03140, GFH08210 | Chlorophyll a-b binding protein, chloroplastic | 0.03 | OrthoFinder | |
| lcl|BLLF01000238.1_cds_GFH09479.1_3956 | HaLaN_04631, GFH09479 | Chlorophyll a-b binding protein, chloroplastic | 0.02 | OrthoFinder | |
| lcl|BLLF01000308.1_cds_GFH10349.1_4826 | HaLaN_05646, GFH10349 | Chlorophyll a-b binding protein, chloroplastic | 0.02 | OrthoFinder | |
| lcl|BLLF01000682.1_cds_GFH14061.1_8538 | HaLaN_10037, GFH14061 | Chlorophyll a-b binding protein, chloroplastic | 0.02 | OrthoFinder | |
| lcl|BLLF01000742.1_cds_GFH14568.1_9045 | HaLaN_10649, GFH14568 | Chlorophyll a-b binding protein, chloroplastic | 0.03 | OrthoFinder | |
| lcl|BLLF01000768.1_cds_GFH14802.1_9279 | HaLaN_10920, GFH14802 | Chlorophyll a-b binding protein, chloroplastic | 0.04 | OrthoFinder | |
| lcl|BLLF01001042.1_cds_GFH16728.1_11205 | HaLaN_13210, GFH16728 | Chlorophyll a-b binding protein, chloroplastic | 0.04 | OrthoFinder | |
| lcl|BLLF01001126.1_cds_GFH17296.1_11773 | HaLaN_13902, GFH17296 | Chlorophyll a-b binding protein, chloroplastic | 0.06 | OrthoFinder | |
| lcl|BLLF01001360.1_cds_GFH18804.1_13281 | HaLaN_15665, GFH18804 | Chlorophyll a-b binding protein, chloroplastic | 0.05 | OrthoFinder | |
| lcl|BLLF01001849.1_cds_GFH21535.1_16012 | HaLaN_18860, GFH21535 | Chlorophyll a-b binding protein, chloroplastic | 0.02 | OrthoFinder | |
| lcl|BLLF01002251.1_cds_GFH23349.1_17826 | HaLaN_20950, GFH23349 | Chlorophyll a-b binding protein, chloroplastic | 0.04 | OrthoFinder | |
| lcl|BLLF01002496.1_cds_GFH24298.1_18775 | HaLaN_22066, GFH24298 | Chlorophyll a-b binding protein, chloroplastic | 0.02 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61161.1_400 | PRW61161 | Chlorophyll a b binding CP29 | 0.02 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56118.1_10249 | PRW56118 | Light harvesting complex a | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009522 | photosystem I | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009538 | photosystem I reaction center | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
| MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
| CC | GO:0030286 | dynein complex | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| MF | GO:2001070 | starch binding | IEP | Enrichment |
| No external refs found! |