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  5. Dusal.0120s00023.1

Dusal.0120s00023.1 (33194376)


Aliases : 33194376

Description : Domain of unknown function DUF4217; Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0002068 (OrthoFinder) Phylogenetic Tree(s): OG0002068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0120s00023.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282600 30779817 DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana 0.02 OrthoFinder
OT_14G02060.1 No alias Helicase, C-terminal; Domain of unknown function... 0.04 OrthoFinder
PTI_02G04280.1 No alias Helicase, C-terminal; Domain of unknown function... 0.01 OrthoFinder
TP05G00180.1 No alias Domain of unknown function DUF4217; Helicase,... 0.02 OrthoFinder
XM_002505445.1 MICPUN_67382, 67382 Helicase, C-terminal; DEAD/DEAH box helicase domain;... 0.02 OrthoFinder
XM_003059722.1 MicpuC2_18446, 18446 Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR025313 DUF4217 394 448
IPR001650 Helicase_C 235 348
IPR011545 DEAD/DEAH_box_helicase_dom 34 199
No external refs found!