Dusal.0108s00005.1 (33189508)

Aliases : 33189508

Description : Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal [Interproscan].

Gene families : OG_01_0002382 (OrthoFinder) Phylogenetic Tree(s): OG0002382_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dusal.0108s00005.1
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020961.135	tig00020961_g16755.t1	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder
Cre01.g039250	30788560, RPS2	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder
Cz06g19150.t1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.02	OrthoFinder
OT_17G01420.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.14	OrthoFinder
PTI_17G01720.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.11	OrthoFinder
Sro693_g188270.1	Contig3212.g25392	40S ribosomal protein S2 (Fragment)	0.14	OrthoFinder
Transcript_contig_79122	79122	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.02	OrthoFinder
Vocar.0001s0807.1	32884773	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.02	OrthoFinder
XM_002502219.1	MICPUN_90856, 90856	Ribosomal protein S5, N-terminal; Ribosomal protein S5,...	0.06	OrthoFinder
XM_003063973.1	MicpuC2_49763, 49763	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.05	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39136.1_2764	PRW39136	40S ribosomal S2-4	0.06	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497763.1_6716	KAA8497763	40S ribosomal protein S2	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Enrichment
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Enrichment
BP	GO:0006772	thiamine metabolic process	IEP	Enrichment
BP	GO:0009228	thiamine biosynthetic process	IEP	Enrichment
CC	GO:0009507	chloroplast	IEP	Enrichment
CC	GO:0009536	plastid	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Enrichment
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Enrichment
BP	GO:0046434	organophosphate catabolic process	IEP	Enrichment
MF	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IEP	Enrichment
BP	GO:0052646	alditol phosphate metabolic process	IEP	Enrichment
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013810	Ribosomal_S5_N	84	148
IPR005324	Ribosomal_S5_C	167	238

External Links

No external refs found!

Dusal.0108s00005.1 (33189508)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation