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  4. Sequence
  5. Dusal.0093s00037.1

Dusal.0093s00037.1 (33185342)


Aliases : 33185342

Description : Histone H2A/H2B/H3; Histone H2A, C-terminal domain [Interproscan].


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0093s00037.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264750 30778682, HTA14 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder
Cre06.g264950 30779952 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder
Cre06.g265350 30779523 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre06.g266700 30779158 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre06.g268050 30779224, HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder
Cre06.g268300 30778781, HTA9 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder
Cre06.g271350 30779391 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre06.g273900 30779778 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre06.g274200 30778751 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre06.g274800 30780111, HTA26 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder
Cre06.g275850 30779335 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder
Cre06.g276500 30778822, HTA23 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre06.g276950 30778754, HTA24 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre12.g504500 30793209 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder
Cre12.g504750 30792225 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre12.g505550 30793129 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre12.g506250 30793152, HTA18 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre13.g567700 30783996 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder
Cre13.g570100 30784159, HTA2 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder
Cre13.g590800 30783997, HTA37 Chromatin organisation.histones.H2A-type histone 0.11 OrthoFinder
Cre13.g591150 30784726, HTA38 Chromatin organisation.histones.H2A-type histone 0.12 OrthoFinder
Cre17.g708550 30781878, HTA20 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre17.g709200 30782358 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre17.g710400 30782701, HTA19 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder
Cre17.g711700 30781638, HTA5 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre17.g713400 30781819 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder
Cre17.g714500 30782017, HTA1 Chromatin organisation.histones.H2A-type histone 0.1 OrthoFinder
Cz02g02050.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.11 OrthoFinder
Cz05g04180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
Cz07g08180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
Cz08g27130.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Cz18g11100.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
Dusal.0093s00031.1 33185335 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.14 OrthoFinder
EOD08304 No alias Putative histone H2A [Ensembl]. 0.2 OrthoFinder
EOD11956 No alias Putative histone H2A [Ensembl]. 0.04 OrthoFinder
EOD14007 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.01 OrthoFinder
EOD22956 No alias Putative histone H2A [Ensembl]. 0.08 OrthoFinder
EOD22963 No alias Putative histone H2A [Ensembl]. 0.08 OrthoFinder
OT_02G00110.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
OT_08G01910.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
OT_12G00910.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
OT_16G01100.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.05 OrthoFinder
PTI_06G01940.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
PTI_06G02110.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
Sro311_g114190.1 Contig909.g9534 Histone H2A 0.01 OrthoFinder
Sro392_g133380.1 Contig4514.g33844 Histone H2A 0.02 OrthoFinder
Sro470_g149450.1 Contig850.g9339 Histone H2A 0.02 OrthoFinder
TP03G01190.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0001s0459.1 32885662 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0001s1633.1 32885235 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0006s0196.1 32893915 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0016s0271.1 32898098 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0018s0027.1 32898733 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0027s0147.1 32887249 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
XM_003054928.1 MicpuC2_12375, 12375 Histone H2A 0.04 OrthoFinder
XM_003058838.1 MicpuC2_17393, 17393 Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.04 OrthoFinder
XM_003063174.1 MicpuC2_11887, 11887 Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56948.1_9006 PRW56948 Histone H2A 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32875.1_3737 PRW32875 Histone H2A 0.05 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33066.1_3814 PRW33066 Histone H2A 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 13 94
IPR032454 Histone_H2A_C 97 130
No external refs found!