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  5. Cpa|evm.model.tig00000142.18

Cpa|evm.model.tig00000142.18 (tig00000142_g8653.t1)


Aliases : tig00000142_g8653.t1

Description : 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum


Gene families : OG_01_0003478 (OrthoFinder) Phylogenetic Tree(s): OG0003478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000142.18
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre12.g512600 30792347, RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.3 OrthoFinder
Cz02g17120.t1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.26 OrthoFinder
Dusal.0152s00012.1 33186214 Ribosomal protein L18e/L15P [Interproscan]. 0.27 OrthoFinder
EOD35516 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.19 OrthoFinder
OT_09G03130.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.23 OrthoFinder
PTI_22G00610.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.44 OrthoFinder
Sro84_g044900.1 Contig220.g2623 60S ribosomal protein L18 0.39 OrthoFinder
SymbC1.scaffold2696.1 2696.1 Ribosomal protein L18e/L15P [Interproscan]. 0.06 OrthoFinder
TP07G02970.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.39 OrthoFinder
Vocar.0016s0167.1 32898010 Ribosomal protein L18e/L15P [Interproscan]. 0.09 OrthoFinder
XM_002506174.1 MICPUN_64167, 64167 Ribosomal protein L18 0.27 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20417.1_5544 PRW20417 60S ribosomal L18-3 0.23 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496158.1_2156 KAA8496158 60S ribosomal protein L18-2 0.22 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 89
No external refs found!