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  5. Dusal.0084s00034.1

Dusal.0084s00034.1 (33201464)


Aliases : 33201464

Description : Helicase, C-terminal; Helicase-associated domain; DEAD/DEAH box helicase domain; Domain of unknown function DUF1605 [Interproscan].


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0084s00034.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.111 tig00000113_g5693.t1 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000796.23 tig00000796_g4246.t1 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder
Cre07.g329150 30774611 Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OrthoFinder
Cz03g11220.t1 No alias Helicase, C-terminal; S1 domain; Helicase-associated... 0.03 OrthoFinder
PTI_05G02970.1 No alias Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
PTI_08G03610.1 No alias Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
Sro4_g003320.1 Contig3815.g29250 Splicing factor ATP-dependent RNA helicase 0.03 OrthoFinder
TP13G03460.1 No alias Domain of unknown function DUF1605; Helicase-associated... 0.01 OrthoFinder
Vocar.0017s0041.1 32891358 Domain of unknown function DUF1605; Helicase,... 0.02 OrthoFinder
XM_002502185.1 MICPUN_81845, 81845 Helicase, C-terminal; Helicase-associated domain; Domain... 0.03 OrthoFinder
XM_003057297.1 MicpuC2_25774, 25774 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 406 519
IPR011545 DEAD/DEAH_box_helicase_dom 16 168
IPR011709 DUF1605 673 751
IPR001650 Helicase_C 215 341
No external refs found!