1. Home
  2. Species
  3. Dunaliella sp.
  4. Sequence
  5. Dusal.0067s00003.1

Dusal.0067s00003.1 (33194677)


Aliases : 33194677

Description : Ribosomal protein L22e [Interproscan].


Gene families : OG_01_0002253 (OrthoFinder) Phylogenetic Tree(s): OG0002253_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0067s00003.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.7 tig00001206_g7490.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 OrthoFinder
Cre07.g357850 30774301, RPL22 Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 OrthoFinder
Cz08g30250.t1 No alias Ribosomal protein L22e [Interproscan]. 0.2 OrthoFinder
EOD18860 No alias Ribosomal protein L22e [Interproscan]. 0.08 OrthoFinder
OT_12G02920.1 No alias Ribosomal protein L22e [Interproscan]. 0.2 OrthoFinder
PTI_20G02050.1 No alias Ribosomal protein L22e [Interproscan]. 0.39 OrthoFinder
Sro89_g046870.1 Contig3846.g29608 60S ribosomal protein L22 0.32 OrthoFinder
SymbC1.scaffold1954.5 1954.5 Ribosomal protein L22e [Interproscan]. 0.02 OrthoFinder
TP06G02320.1 No alias Ribosomal protein L22e [Interproscan]. 0.28 OrthoFinder
Transcript_contig_80087 80087 Ribosomal protein L22e [Interproscan]. 0.04 OrthoFinder
Vocar.0051s0045.1 32886996 Ribosomal protein L22e [Interproscan]. 0.18 OrthoFinder
XM_002499837.1 MICPUN_90144, 90144 Ribosomal protein L22e [Interproscan]. 0.23 OrthoFinder
XM_003055223.1 MicpuC2_31192, 31192 Ribosomal protein L22e [Interproscan]. 0.13 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39267.1_2590 PRW39267 60S ribosomal L22-2 0.23 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499191.1_8144 KAA8499191 60S ribosomal protein L22 0.22 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 17 126
No external refs found!