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Aliases : 33203229
Description : Short-chain dehydrogenase/reductase SDR [Interproscan].
Gene families : OG_01_0001886 (OrthoFinder) Phylogenetic Tree(s): OG0001886_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.0059s00003.1 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000076.85 | tig00000076_g2383.t1 | Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... | 0.01 | OrthoFinder | |
| Cre01.g015350 | 30789577, POR1 | Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... | 0.09 | OrthoFinder | |
| Cz06g28160.t1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.09 | OrthoFinder | |
| OT_07G01780.1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.06 | OrthoFinder | |
| PTI_07G02960.1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| Sro925_g220860.1 | Contig3078.g24545 | Protochlorophyllide reductase (Fragment) | 0.05 | OrthoFinder | |
| TP05G01150.1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0011s0096.1 | 32895452 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.03 | OrthoFinder | |
| XM_002500119.1 | MICPUN_93411, 93411 | Light-dependent protochlorophyllide oxido-reductase... | 0.02 | OrthoFinder | |
| lcl|BLLF01002293.1_cds_GFH23526.1_18003 | HaLaN_21149, GFH23526 | NADPH-protochlorophyllide oxidoreductase | 0.08 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494935.1_3465 | KAA8494935 | Protochlorophyllide reductase A, chloroplastic | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009522 | photosystem I | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002347 | SDR_fam | 86 | 229 |
| No external refs found! |