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  5. Dusal.0053s00007.1

Dusal.0053s00007.1 (33186577)


Aliases : 33186577

Description : Plectin/S10, N-terminal [Interproscan].


Gene families : OG_01_0003431 (OrthoFinder) Phylogenetic Tree(s): OG0003431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0053s00007.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001164.5 tig00001164_g7395.t1 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica 0.2 OrthoFinder
Cre09.g411100 30781073, RPS10 Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 OrthoFinder
Cz05g11070.t1 No alias Plectin/S10, N-terminal [Interproscan]. 0.22 OrthoFinder
EOD07351 No alias Plectin/S10, N-terminal [Interproscan]. 0.04 OrthoFinder
EOD26565 No alias Plectin/S10, N-terminal [Interproscan]. 0.06 OrthoFinder
EOD33155 No alias Plectin/S10, N-terminal [Interproscan]. 0.04 OrthoFinder
OT_01G00990.1 No alias Plectin/S10, N-terminal [Interproscan]. 0.22 OrthoFinder
PTI_09G04580.1 No alias Plectin/S10, N-terminal [Interproscan]. 0.26 OrthoFinder
Sro128_g061360.1 Contig1654.g14912 40S ribosomal protein S10 0.26 OrthoFinder
TP04G01520.1 No alias Plectin/S10, N-terminal [Interproscan]. 0.2 OrthoFinder
Vocar.0008s0151.1 32897202 Plectin/S10, N-terminal [Interproscan]. 0.13 OrthoFinder
XM_002500912.1 MICPUN_90249, 90249 Plectin/S10, N-terminal [Interproscan]. 0.09 OrthoFinder
XM_003056116.1 MicpuC2_55703, 55703 40S ribosomal protein S10 (RPS10) 0.11 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21048.1_4816 PRW21048 40S ribosomal S10 0.21 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496384.1_113 KAA8496384 40S ribosomal protein S10 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 70
No external refs found!