1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00020723.23

Cpa|evm.model.tig00020723.23 (tig00020723_g13442.t1)


Aliases : tig00020723_g13442.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL35a component


Gene families : OG_01_0003454 (OrthoFinder) Phylogenetic Tree(s): OG0003454_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020723.23
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre10.g459250 30790514, RPL35a Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 OrthoFinder
Cz08g32140.t1 No alias Ribosomal protein L35A [Interproscan]. 0.3 OrthoFinder
Dusal.0293s00005.1 33190176 Ribosomal protein L35A [Interproscan]. 0.14 OrthoFinder
EOD28237 No alias Ribosomal protein L35A [Interproscan]. 0.24 OrthoFinder
EOD40099 No alias 60S ribosomal protein L35A [Ensembl]. 0.24 OrthoFinder
OT_08G03250.1 No alias Ribosomal protein L35A [Interproscan]. 0.17 OrthoFinder
PTI_26G00860.1 No alias Ribosomal protein L35A [Interproscan]. 0.33 OrthoFinder
Sro60_g034780.1 Contig797.g8955 60S ribosomal protein L35a 0.37 OrthoFinder
SymbC1.scaffold1015.3 1015.3 Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
TP10G03680.1 No alias Ribosomal protein L35A [Interproscan]. 0.2 OrthoFinder
Vocar.0020s0177.1 32886748 Ribosomal protein L35A [Interproscan]. 0.2 OrthoFinder
XM_002508291.1 MICPUN_108826, 108826 Ribosomal protein L35A [Interproscan]. 0.32 OrthoFinder
XM_003058988.1 MicpuC2_58446, 58446 Ribosomal protein L35A [Interproscan]. 0.11 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57926.1_8416 PRW57926 60S ribosomal L35a-3 0.22 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495080.1_3610 KAA8495080 60S ribosomal protein L35a 0.34 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 4 98
No external refs found!