Dusal.0048s00030.1 (33189467)

Aliases : 33189467

Description : ABC transporter-like; ABC-2 type transporter [Interproscan].

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dusal.0048s00030.1
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
Cre07.g339104	30774517	ABC transporter G family member 28 OS=Arabidopsis thaliana	0.02	OrthoFinder
Transcript_contig_1768	1768	Hypothetical protein	0.01	OrthoFinder
Transcript_contig_61805	61805	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
Transcript_contig_78150	78150	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
CC	GO:0019898	extrinsic component of membrane	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
MF	GO:0033218	amide binding	IEP	Enrichment
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
MF	GO:0050661	NADP binding	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
MF	GO:0120227	acyl-CoA binding	IEP	Enrichment
MF	GO:1901567	fatty acid derivative binding	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	226	437
IPR003439	ABC_transporter-like_ATP-bd	16	72

External Links

No external refs found!