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  5. Dusal.0042s00004.1

Dusal.0042s00004.1 (33189888)


Aliases : 33189888

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0042s00004.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cre01.g066917 30788321, LHCBM1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cre03.g156900 30787808, LHCBM5 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cre04.g232104 30791553, LHCBM3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre06.g272650 30779881, LHCA8 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 OrthoFinder
Cre06.g278213 30779171, LHCA6 Chlorophyll a-b binding protein P4, chloroplastic... 0.03 OrthoFinder
Cre06.g283050 30779127, LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 OrthoFinder
Cre06.g283950 30779716, LHCBM4 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre06.g284250 30779962, LHCBM8 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder
Cre06.g285250 30779463, LHCBM6 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre07.g344950 30774737, LHCA9 Photosystem I chlorophyll a/b-binding protein 5,... 0.04 OrthoFinder
Cre10.g425900 30790196, LHCA5 Chlorophyll a-b binding protein 4, chloroplastic... 0.03 OrthoFinder
Cre10.g452050 30790835, LHCA4 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder
Cre11.g467573 30776039, LHCA3 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre12.g508750 30791684, LHCA2 Photosystem I chlorophyll a/b-binding protein 6,... 0.04 OrthoFinder
Cre12.g548400 30793460, LHCBM2 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cre12.g548950 30793494, LHCBM7 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre16.g673650 30777655, LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre16.g687900 30778224, LHCA7 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre17.g720250 30782643, LHCB4 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cz01g23030.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz03g26240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz04g04130.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz04g09210.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz07g02100.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz08g11160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz09g32070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz10g10160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz12g16070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz13g03240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz15g09060.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz15g17110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz16g14150.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
OT_01G04980.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
OT_02G03050.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
OT_02G04550.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_03G04590.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_03G04600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_03G04960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
OT_05G03910.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
OT_09G04490.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_14G01300.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
OT_16G00460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
OT_16G02540.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_18G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
PTI_20G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58829 58829 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Transcript_contig_79793 79793 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
UNPLg00080.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Vocar.0002s0071.1 32890569 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0281.1 32890560 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0333.1 32890723 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Vocar.0005s0361.1 32883819 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0009s0370.1 32893259 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0011s0017.1 32895358 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0014s0016.1 32888452 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0243.1 32897935 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0018s0037.1 32898532 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0124.1 32896004 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0023s0180.1 32883354 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0028s0157.1 32895586 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
XM_002499584.1 MICPUN_113644, 113644 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_002500767.1 MICPUN_90184, 90184 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_002501106.1 MICPUN_90394, 90394 Chlorophyll a/b-binding protein, psi-associated,... 0.03 OrthoFinder
XM_002503617.1 MICPUN_104895, 104895 Prasinophyte specific chlorophyll a/b-binding protein,... 0.02 OrthoFinder
XM_002505041.1 MICPUN_104964, 104964 Chlorophyll a/b-binding protein, psi-associated,... 0.03 OrthoFinder
XM_003054893.1 MicpuC2_45156, 45156 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_003055372.1 MicpuC2_50023, 50023 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA5) 0.02 OrthoFinder
XM_003055426.1 MicpuC2_46212, 46212 Prasinophyte specific chlorophyll a/b-binding protein (LHCP2.7) 0.03 OrthoFinder
XM_003056382.1 MicpuC2_70884, 70884 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.02 OrthoFinder
XM_003057773.1 MicpuC2_45464, 45464 Prasinophyte specific chlorophyll a/b-binding protein,... 0.04 OrthoFinder
XM_003057791.1 MicpuC2_57460, 57460 Prasinophyte specific chlorophyll a/b-binding protein,... 0.04 OrthoFinder
XM_003058148.1 MicpuC2_70880, 70880 Prasinophyte specific chlorophyll a/b-binding protein,... 0.04 OrthoFinder
XM_003059477.1 MicpuC2_49623, 49623 Chlorophyll a/b-binding protein, psi-associated,... 0.05 OrthoFinder
XM_003061061.1 MicpuC2_70879, 70879 Prasinophyte specific chlorophyll a/b-binding protein,... 0.04 OrthoFinder
lcl|BLLF01000742.1_cds_GFH14568.1_9045 HaLaN_10649, GFH14568 Chlorophyll a-b binding protein, chloroplastic 0.06 OrthoFinder
lcl|BLLF01000768.1_cds_GFH14802.1_9279 HaLaN_10920, GFH14802 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01001126.1_cds_GFH17296.1_11773 HaLaN_13902, GFH17296 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01001360.1_cds_GFH18804.1_13281 HaLaN_15665, GFH18804 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01001656.1_cds_GFH20549.1_15026 HaLaN_17690, GFH20549 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01002496.1_cds_GFH24298.1_18775 HaLaN_22066, GFH24298 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61161.1_400 PRW61161 Chlorophyll a b binding CP29 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61250.1_625 PRW61250 Light-harvesting of photosystem I 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61582.1_286 PRW61582 Cytochrome b-c1 complex subunit Rieske-mitochondrial 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59323.1_7029 PRW59323 Light-harvesting of photosystem I 0.05 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56910.1_9115 PRW56910 Light-harvesting of photosystem I 0.04 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57230.1_9116 PRW57230 Light-harvesting of photosystem I 0.05 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57333.1_9090 PRW57333 Chlorophyll a b-binding apo CP26 precursor 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56009.1_10248 PRW56009 Light-harvesting of photosystem I 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56118.1_10249 PRW56118 Light harvesting complex a 0.05 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45536.1_1258 PRW45536 Light-harvesting of photosystem I 0.05 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45697.1_1257 PRW45697 Light-harvesting of photosystem I 0.05 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20612.1_5288 PRW20612 Chlorophyll a b-binding 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 44 195
No external refs found!