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  5. Dusal.0033s00033.1

Dusal.0033s00033.1 (33202502)


Aliases : 33202502

Description : Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0000285 (OrthoFinder) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0033s00033.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre10.g430950 30790110 Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder
Cz01g45220.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.02 OrthoFinder
Dusal.0021s00029.1 33197786 SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD06519 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
EOD21201 No alias SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
EOD37408 No alias SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
EOD38972 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.04 OrthoFinder
TP13G01520.1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal;... 0.02 OrthoFinder
XM_002508265.1 MICPUN_60933, 60933 SNF2 super family (RAD54) 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 38 240
IPR001650 Helicase_C 302 401
No external refs found!