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  5. Cpa|evm.model.tig00020710.84

Cpa|evm.model.tig00020710.84 (tig00020710_g13337.t1)


Aliases : tig00020710_g13337.t1

Description : Probable histidine kinase 4 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020710.84
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000140.15 tig00000140_g8470.t1 Ethylene receptor 1 OS=Cucumis melo var. cantalupensis 0.04 OrthoFinder
Cpa|evm.model.tig00000498.74 tig00000498_g1651.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001155.14 tig00001155_g7320.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020660.25 tig00021501_g21945.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00020903.6 tig00020903_g15073.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020999.10 tig00000743_g3872.t2 No description available 0.05 OrthoFinder
Cre11.g469400 30775874 No description available 0.02 OrthoFinder
OT_17G01290.1 No alias Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Sro2226_g319830.1 Contig2376.g19526 Osmosensing histidine protein kinase SLN1 0.02 OrthoFinder
Sro346_g122750.1 Contig4731.g35102 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
Sro508_g156640.1 Contig2824.g22619 Hybrid signal transduction histidine kinase K 0.01 OrthoFinder
Sro728_g193740.1 Contig1495.g13658 Hybrid signal transduction histidine kinase 0.02 OrthoFinder
SymbC1.scaffold3627.5 3627.5 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
lcl|BLLF01000478.1_cds_GFH12211.1_6688 HaLaN_07851, GFH12211 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01001045.1_cds_GFH16747.1_11224 HaLaN_13231, GFH16747 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01001425.1_cds_GFH19214.1_13691 HaLaN_16126, GFH19214 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003594 HATPase_C 730 852
IPR001789 Sig_transdc_resp-reg_receiver 1561 1636
IPR003661 HisK_dim/P 620 683
No external refs found!