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Aliases : 33192235
Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.0031s00043.1 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021464.4 | tig00021464_g21711.t1 | No description available | 0.01 | OrthoFinder | |
| Cz03g21120.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD35081 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_03G00400.1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro4_g003060.1 | Contig3815.g29224 | Splicing factor U2af large subunit | 0.01 | OrthoFinder | |
| Transcript_contig_55294 | 55294 | RNA recognition motif domain [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003980 | UDP-glucose:glycoprotein glucosyltransferase activity | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Enrichment |
| BP | GO:0045048 | protein insertion into ER membrane | IEP | Enrichment |
| BP | GO:0045116 | protein neddylation | IEP | Enrichment |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Enrichment |
| BP | GO:0051205 | protein insertion into membrane | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 254 | 323 |
| No external refs found! |