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  5. Dusal.0029s00015.1

Dusal.0029s00015.1 (33203771)


Aliases : 33203771

Description : Ribosomal protein S12/S23 [Interproscan].


Gene families : OG_01_0004164 (OrthoFinder) Phylogenetic Tree(s): OG0004164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0029s00015.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001264.27 tig00001264_g7883.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 OrthoFinder
Cre12.g504200 30792072, RPS23 Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 OrthoFinder
Cz02g32260.t1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.18 OrthoFinder
EOD07302 No alias Ribosomal protein S12/S23 [Interproscan]. 0.09 OrthoFinder
EOD33195 No alias Ribosomal protein S12/S23 [Interproscan]. 0.09 OrthoFinder
OT_06G01850.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.05 OrthoFinder
PTI_02G00080.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.28 OrthoFinder
Sro922_g220630.1 Contig2958.g23506 40S ribosomal protein S23 0.3 OrthoFinder
TP05G01460.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.25 OrthoFinder
XM_002499719.1 MICPUN_89912, 89912 Ribosomal protein S12/S23 [Interproscan]. 0.25 OrthoFinder
XM_003062101.1 MicpuC2_48397, 48397 Ribosomal protein S12/S23 [Interproscan]. 0.12 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45112.1_1697 PRW45112 40S ribosomal S23 0.13 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497390.1_1119 KAA8497390 40S ribosomal protein S23 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 31 141
No external refs found!