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  5. Dusal.0020s00025.1

Dusal.0020s00025.1 (33193741)


Aliases : 33193741

Description : Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0020s00025.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000796.23 tig00000796_g4246.t1 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 OrthoFinder
EOD10970 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
EOD26794 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
EOD28324 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
EOD31583 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
OT_01G03120.1 No alias Helicase-associated domain; Helicase, C-terminal; Domain... 0.03 OrthoFinder
OT_14G00410.1 No alias Helicase-associated domain; Helicase, C-terminal; Domain... 0.02 OrthoFinder
Sro54_g031680.1 Contig2430.g19856 Splicing factor ATP-dependent RNA helicase 0.01 OrthoFinder
Transcript_contig_89480 89480 Helicase-associated domain; Helicase, C-terminal; Domain... 0.01 OrthoFinder
Vocar.0001s0362.1 32885233 Helicase, C-terminal; Domain of unknown function... 0.03 OrthoFinder
Vocar.0015s0262.1 32898968 Helicase-associated domain; Domain of unknown function... 0.02 OrthoFinder
Vocar.0017s0041.1 32891358 Domain of unknown function DUF1605; Helicase,... 0.01 OrthoFinder
XM_003057297.1 MicpuC2_25774, 25774 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
XM_003061488.1 MicpuC2_51326, 51326 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45384.1_1249 PRW45384 ATP-dependent RNA helicase dhx8 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006474 N-terminal protein amino acid acetylation IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Enrichment
BP GO:0018206 peptidyl-methionine modification IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Enrichment
CC GO:0031417 NatC complex IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011709 DUF1605 606 671
IPR001650 Helicase_C 307 395
IPR007502 Helicase-assoc_dom 457 546
IPR011545 DEAD/DEAH_box_helicase_dom 79 228
No external refs found!