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  5. Dusal.0017s00027.1

Dusal.0017s00027.1 (33200503)


Aliases : 33200503

Description : RNA recognition motif domain; Cold-shock protein, DNA-binding [Interproscan].


Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0017s00027.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre06.g268600 30779749, NAB1 External stimuli response.temperature.Csd... 0.05 OrthoFinder
Cz05g02010.t1 No alias Cold-shock protein, DNA-binding; RNA recognition motif... 0.03 OrthoFinder
Sro1493_g277300.1 Contig1998.g17099 Y-box-binding protein 2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 35 105
IPR000504 RRM_dom 238 305
No external refs found!