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  5. Dusal.0017s00011.1

Dusal.0017s00011.1 (33200516)


Aliases : 33200516

Description : Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan].


Gene families : OG_01_0002728 (OrthoFinder) Phylogenetic Tree(s): OG0002728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0017s00011.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.79 tig00020610_g12025.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 OrthoFinder
Cre06.g272800 30780026, RPS8 Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 OrthoFinder
Cz09g32130.t1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.14 OrthoFinder
EOD23240 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.08 OrthoFinder
EOD29180 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.13 OrthoFinder
OT_14G02570.1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.06 OrthoFinder
PTI_01G03760.1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.17 OrthoFinder
Sro1192_g251020.1 Contig331.g4398 40S ribosomal protein S8 0.19 OrthoFinder
SymbC1.scaffold11142.1 11142.1 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.03 OrthoFinder
TP13G01390.1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.18 OrthoFinder
Vocar.0002s0334.1 32890975 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.04 OrthoFinder
XM_002505379.1 MICPUN_95694, 95694 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.14 OrthoFinder
XM_003059653.1 MicpuC2_34143, 34143 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01000389.1_cds_GFH11277.1_5754 HaLaN_06752, GFH11277 40S ribosomal protein S8 0.08 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61452.1_199 PRW61452 40S ribosomal S8 0.05 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490882.1_5654 KAA8490882 40S ribosomal protein S8 0.17 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 1 187
No external refs found!