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  5. Dusal.0015s00045.1

Dusal.0015s00045.1 (33190948)


Aliases : 33190948

Description : Splicing factor 3A subunit 1; SWAP/Surp [Interproscan].


Gene families : OG_01_0002237 (OrthoFinder) Phylogenetic Tree(s): OG0002237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0015s00045.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
EOD28674 No alias SWAP/Surp; Splicing factor 3A subunit 1 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_90130 90130 SWAP/Surp; Splicing factor 3A subunit 1 [Interproscan]. 0.02 OrthoFinder
XM_002506683.1 MICPUN_104601, 104601 Splicing factor 3A subunit 1; SWAP/Surp; Ubiquitin-like... 0.03 OrthoFinder
XM_003062813.1 MicpuC2_42493, 42493 Splicing factor 3A subunit 1; SWAP/Surp [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022030 SF3A1_dom 282 558
IPR000061 Surp 211 261
No external refs found!