Aliases : 33200934
Description : Ribosomal protein L34Ae [Interproscan].
Gene families : OG_01_0004984 (OrthoFinder) Phylogenetic Tree(s): OG0004984_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dusal.0013s00032.1 | |
Cluster | HCCA: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000632.3 | tig00000632_g2738.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder | |
Cre16.g661050 | 30777324, RPL34 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.22 | OrthoFinder | |
OT_04G04220.1 | No alias | Ribosomal protein L34Ae [Interproscan]. | 0.1 | OrthoFinder | |
PTI_04G00620.1 | No alias | Ribosomal protein L34Ae [Interproscan]. | 0.2 | OrthoFinder | |
Sro327_g118460.1 | Contig839.g9254 | 60S ribosomal protein L34 | 0.28 | OrthoFinder | |
SymbC1.scaffold193.9 | 193.9 | Ribosomal protein L34Ae [Interproscan]. | 0.09 | OrthoFinder | |
TP04G05710.1 | No alias | Ribosomal protein L34Ae [Interproscan]. | 0.21 | OrthoFinder | |
Vocar.0004s0133.1 | 32889701 | Ribosomal protein L34Ae [Interproscan]. | 0.1 | OrthoFinder | |
XM_002504768.1 | MICPUN_86588, 86588 | Ribosomal protein L34Ae [Interproscan]. | 0.15 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495412.1_1410 | KAA8495412 | 60S ribosomal protein L34 | 0.11 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
CC | GO:0009523 | photosystem II | IEP | Enrichment |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0034357 | photosynthetic membrane | IEP | Enrichment |
CC | GO:0042651 | thylakoid membrane | IEP | Enrichment |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008195 | Ribosomal_L34Ae | 1 | 96 |
No external refs found! |