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  5. Dusal.0008s00025.1

Dusal.0008s00025.1 (33198885)


Aliases : 33198885

Description : Glycoside hydrolase, family 13, N-terminal [Interproscan].


Gene families : OG_01_0000695 (OrthoFinder) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0008s00025.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cre17.g698850 30782788, ISA2 Isoamylase 2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz10g16050.t1 No alias Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
Transcript_contig_54882 54882 Glycoside hydrolase, family 13, N-terminal; Glycosyl... 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59985.1_6112 PRW59985 Isoamylase chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008193 tRNA guanylyltransferase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 102 179
No external refs found!