Dusal.0002s00028.1 (33187970)


Aliases : 33187970

Description : Photosynthesis system II assembly factor Ycf48/Hcf136-like domain [Interproscan].


Gene families : OG_01_0003736 (OrthoFinder) Phylogenetic Tree(s): OG0003736_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0002s00028.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cre06.g273700 30778394 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder
Cz10g21040.t1 No alias Photosynthesis system II assembly factor... 0.02 OrthoFinder
PTI_13G02840.1 No alias Photosynthesis system II assembly factor... 0.03 OrthoFinder
TP22G01760.1 No alias Photosynthesis system II assembly factor... 0.03 OrthoFinder
Vocar.0002s0344.1 32890876 Photosynthesis system II assembly factor... 0.04 OrthoFinder
XM_002502020.1 MICPUN_58459, 58459 Photosynthesis system II assembly factor... 0.02 OrthoFinder
XM_003057421.1 MicpuC2_32576, 32576 Photosynthesis system II assembly factor... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61576.1_616 PRW61576 Photosystem II stability assembly factor chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 238 299
IPR028203 PSII_CF48-like_dom 118 235
No external refs found!