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  5. Dusal.0002s00028.1

Dusal.0002s00028.1 (33187970)


Aliases : 33187970

Description : Photosynthesis system II assembly factor Ycf48/Hcf136-like domain [Interproscan].


Gene families : OG_01_0003736 (OrthoFinder) Phylogenetic Tree(s): OG0003736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0002s00028.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cre06.g273700 30778394 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder
Cz10g21040.t1 No alias Photosynthesis system II assembly factor... 0.02 OrthoFinder
PTI_13G02840.1 No alias Photosynthesis system II assembly factor... 0.03 OrthoFinder
TP22G01760.1 No alias Photosynthesis system II assembly factor... 0.03 OrthoFinder
Vocar.0002s0344.1 32890876 Photosynthesis system II assembly factor... 0.04 OrthoFinder
XM_002502020.1 MICPUN_58459, 58459 Photosynthesis system II assembly factor... 0.02 OrthoFinder
XM_003057421.1 MicpuC2_32576, 32576 Photosynthesis system II assembly factor... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61576.1_616 PRW61576 Photosystem II stability assembly factor chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 238 299
IPR028203 PSII_CF48-like_dom 118 235
No external refs found!