Dusal.0001s00040.1 (33198798)

Aliases : 33198798

Description : Ribosomal protein S21e [Interproscan].

Gene families : OG_01_0003705 (OrthoFinder) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.0001s00040.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.14 tig00020780_g13766.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cre03.g203450 30787782, RPS21 Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 OrthoFinder
EOD12033 No alias Ribosomal protein S21e [Interproscan]. 0.06 OrthoFinder
OT_16G01860.1 No alias Ribosomal protein S21e [Interproscan]. 0.15 OrthoFinder
PTI_25G00250.1 No alias Ribosomal protein S21e [Interproscan]. 0.29 OrthoFinder
Sro6_g004850.1 Contig175.g1990 40S ribosomal protein S21 0.3 OrthoFinder
SymbC1.scaffold4516.5 4516.5 Ribosomal protein S21e [Interproscan]. 0.02 OrthoFinder
TP04G05880.1 No alias Ribosomal protein S21e [Interproscan]. 0.15 OrthoFinder
Vocar.0011s0134.1 32895267 Ribosomal protein S21e [Interproscan]. 0.07 OrthoFinder
XM_002506478.1 MICPUN_109558, 109558 Ribosomal protein S21e [Interproscan]. 0.19 OrthoFinder
XM_003063433.1 MicpuC2_45937, 45937 Ribosomal protein S21e [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01004584.1_cds_GFH29895.1_24372 HaLaN_28641, GFH29895 40S ribosomal protein S21 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60607.1_4698 PRW60607 40S ribosomal S21-2 0.2 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498324.1_7277 KAA8498324 40S ribosomal protein S21 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!