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  5. Dusal.0001s00013.1

Dusal.0001s00013.1 (33198814)


Aliases : 33198814

Description : SNF2-related, N-terminal domain; Helicase, C-terminal; Domain of unknown function DUF1086; Chromo domain [Interproscan].


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0001s00013.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre03.g162701 30788203 Chromatin structure-remodeling complex protein SYD... 0.01 OrthoFinder
Cz03g32130.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.02 OrthoFinder
EOD25651 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.01 OrthoFinder
EOD27153 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.01 OrthoFinder
EOD36557 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
PTI_02G06230.1 No alias Bromodomain; Helicase, C-terminal; Snf2, ATP coupling... 0.01 OrthoFinder
Sro19_g013190.1 Contig446.g5983 CHD3-type chromatin-remodeling factor 0.01 OrthoFinder
TP07G00550.1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58677.1_7830 PRW58677 Chromatin structure-remodeling complex SYD-like isoform X1 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18335.1_5824 PRW18335 TATA-binding-associated factor 172 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 980 1086
IPR009462 DUF1086 1437 1582
IPR023780 Chromo_domain 411 450
IPR000330 SNF2_N 655 949
No external refs found!