SymbC1.scaffold968.9 (968.9)

Aliases : 968.9

Description : Ubiquitin-conjugating enzyme E2; Cullin, N-terminal; Cullin protein, neddylation domain; Poly(ADP-ribose) polymerase, catalytic domain; Zinc finger, C3HC4 type (RING finger) [Interproscan].

Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold968.9
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
EOD14996	No alias	Cullin, N-terminal; Cullin protein, neddylation domain...	0.01	OrthoFinder
EOD28450	No alias	Cullin, N-terminal; Cullin protein, neddylation domain...	0.01	OrthoFinder
OT_07G00170.1	No alias	Cullin protein, neddylation domain; Cullin, N-terminal...	0.01	OrthoFinder
lcl\|LHPG02000021.1_cds_PRW20903.1_5012	PRW20903	Cullin-1	0.01	OrthoFinder
lcl\|VRMN01000033.1_cds_KAA8490321.1_5546	KAA8490321	Cullin-1	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016763	pentosyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	2	367
IPR001373	Cullin_N	809	1049
IPR019559	Cullin_neddylation_domain	1075	1102
IPR012317	Poly(ADP-ribose)pol_cat_dom	1442	1628
IPR000608	UBQ-conjugat_E2	714	783

External Links

No external refs found!

SymbC1.scaffold968.9 (968.9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation