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  5. Cpa|evm.model.tig00000140.12

Cpa|evm.model.tig00000140.12 (tig00000140_g8470.t1)


Aliases : tig00000140_g8470.t1

Description : Histidine kinase 3 OS=Arabidopsis thaliana


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000140.12
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000743.19 tig00000743_g3872.t2 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021326.12 tig00021326_g20275.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cpa|evm.model.tig00021501.5 tig00021501_g21945.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 383 491
IPR001789 Sig_transdc_resp-reg_receiver 628 717
IPR003594 HATPase_C 175 336
IPR003661 HisK_dim/P 65 128
No external refs found!